4b50eb041ce3a84e9ffdc37232a99f91133dbd2c,nilearn/input_data/tests/test_nifti_spheres_masker.py,,test_sphere_extraction,#,19

Before Change


    masker.fit()
    // Test the transform
    s = masker.transform(img)
    mask = np.asarray(
        [
            [
                [0, 0, 0],
                [0, 1, 0],
                [0, 0, 0]
            ],
            [
                [0, 1, 0],
                [1, 1, 1],
                [0, 1, 0]
            ],
            [
                [0, 0, 0],
                [0, 1, 0],
                [0, 0, 0]
            ]
        ], dtype=bool
    )
    assert_array_equal(s[:, 0], np.mean(data[mask], axis=0))

def test_anisotropic_sphere_extraction():
    data = np.random.random((3, 3, 3, 5))

After Change


    mask[1, 1, :] = True
    assert_array_equal(s[:, 0], np.mean(data[mask], axis=0))
    // Now with a mask
    mask_img = np.zeros((3, 3, 3))
    mask_img[1, :, :] = 1
    mask_img = nibabel.Nifti1Image(mask_img, np.eye(4))
    masker = NiftiSpheresMasker([(1, 1, 1)], radius=1, mask_img=mask_img)
    masker.fit()
    s = masker.transform(img)
    assert_array_equal(s[:, 0],
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 3

Non-data size: 6

Instances


Project Name: nilearn/nilearn
Commit Name: 4b50eb041ce3a84e9ffdc37232a99f91133dbd2c
Time: 2015-05-07
Author: abraham.alexandre@gmail.com
File Name: nilearn/input_data/tests/test_nifti_spheres_masker.py
Class Name:
Method Name: test_sphere_extraction


Project Name: nilearn/nilearn
Commit Name: 9f2270095382866c4c2ac471c9085d7871d9ef97
Time: 2015-12-03
Author: elvis.dohmatob@inria.fr
File Name: nilearn/plotting/tests/test_find_cuts.py
Class Name:
Method Name: test_fast_abs_percentile_no_index_error_find_cuts


Project Name: nilearn/nilearn
Commit Name: 958eeaaa462b1c7f8f98dea8ba2cec5cf6ab32d8
Time: 2015-05-13
Author: abraham.alexandre@gmail.com
File Name: nilearn/input_data/tests/test_nifti_spheres_masker.py
Class Name:
Method Name: test_sphere_extraction