19ae606b4608957335ce16b8bd2a9bd2ecd7e098,tutorial/load_dictionaries.py,,load_acronym_dictionary,#,57

Before Change

    diseases.update(doid)
    
    dictfile = "data/dicts/ncbi_training_diseases.txt"
    terms = [line.strip().split("\t")[0] for line in open(dictfile).readlines()]
    terms = {word:1 for word in terms if word.isupper()}
    diseases.update(terms)
    
    // filter by char length

After Change

    Load a dictionary of disease phrases **as a list**.
    NOTE: Eventually we"ll want to pass along IDs
    
    a = set()
    
    // UMLS disorders
    dictfile = "data/dicts/umls_disorders_v2.bz2"
    diseases = [line.strip().split("\t")[0] for line in bz2.BZ2File(dictfile, "rb").readlines()]

Instances