622b310cb082f9e41f6d27d5c750a5032bc5b6e2,nilearn/regions/tests/test_parcellations.py,,test_fit_transform,#,213
Before Change
confounds = rng.randn(*(10, 3))
confounds_list = [confounds, confounds, confounds]
if LooseVersion(sklearn.__version__) >= LooseVersion("0.15"):
for method in ["kmeans", "ward", "complete", "average"]:
parcellator = Parcellations(method=method, n_parcels=5)
signals = parcellator.fit_transform(fmri_imgs)
assert_true(parcellator.labels_img_ is not None)
if method != "kmeans":
assert_true(parcellator.connectivity_ is not None)
assert_true(parcellator.masker_ is not None)
// fit_transform with confounds
signals = parcellator.fit_transform(fmri_imgs,
confounds=confounds_list)
assert_true(isinstance(signals, list))
assert_equal(signals[0].shape, (10, 5))
def test_inverse_transform():
rng = np.random.RandomState(0)
data = np.ones((10, 11, 12, 10))
data[6, 7, 8] = 2
After Change
confounds = rng.randn(*(10, 3))
confounds_list = [confounds, confounds, confounds]
for method in ["kmeans", "ward", "complete", "average"]:
parcellator = Parcellations(method=method, n_parcels=5)
signals = parcellator.fit_transform(fmri_imgs)
assert_true(parcellator.labels_img_ is not None)
if method != "kmeans":
assert_true(parcellator.connectivity_ is not None)
assert_true(parcellator.masker_ is not None)
// fit_transform with confounds
signals = parcellator.fit_transform(fmri_imgs,
confounds=confounds_list)
assert_true(isinstance(signals, list))
assert_equal(signals[0].shape, (10, 5))
def test_inverse_transform():
rng = np.random.RandomState(0)
data = np.ones((10, 11, 12, 10))
data[6, 7, 8] = 2
In pattern: SUPERPATTERN
Frequency: 5
Non-data size: 10
Instances
Project Name: nilearn/nilearn
Commit Name: 622b310cb082f9e41f6d27d5c750a5032bc5b6e2
Time: 2018-03-08
Author: dkamalakarreddy@gmail.com
File Name: nilearn/regions/tests/test_parcellations.py
Class Name:
Method Name: test_fit_transform
Project Name: nilearn/nilearn
Commit Name: 622b310cb082f9e41f6d27d5c750a5032bc5b6e2
Time: 2018-03-08
Author: dkamalakarreddy@gmail.com
File Name: nilearn/regions/tests/test_parcellations.py
Class Name:
Method Name: test_parcellations_transform_multi_nifti_images
Project Name: nilearn/nilearn
Commit Name: f3a2c1c56b56f28f88963db869377036f01af831
Time: 2018-08-04
Author: kc.insight.pi@gmail.com
File Name: nilearn/connectome/group_sparse_cov.py
Class Name: GroupSparseCovarianceCV
Method Name: fit
Project Name: nilearn/nilearn
Commit Name: 622b310cb082f9e41f6d27d5c750a5032bc5b6e2
Time: 2018-03-08
Author: dkamalakarreddy@gmail.com
File Name: nilearn/regions/tests/test_parcellations.py
Class Name:
Method Name: test_parcellations_fit_on_single_nifti_image
Project Name: nilearn/nilearn
Commit Name: 622b310cb082f9e41f6d27d5c750a5032bc5b6e2
Time: 2018-03-08
Author: dkamalakarreddy@gmail.com
File Name: nilearn/regions/tests/test_parcellations.py
Class Name:
Method Name: test_inverse_transform