4a432c5225262f26517776aa865c4c8428d808ad,pynets/plotting/plot_graphs.py,,plot_conn_mat,#Any#Any#Any#Any#Any#Any#,17

Before Change

    except RuntimeWarning:
        print("Connectivity matrix too sparse for plotting...")

    if len(labels) > 150:
        tick_interval = int(np.around(len(labels)/50))
    else:
        tick_interval = int(np.around(len(labels)))
    plt.axes().yaxis.set_major_locator(mticker.MultipleLocator(tick_interval))
    plt.axes().xaxis.set_major_locator(mticker.MultipleLocator(tick_interval))
    plt.savefig(out_path_fig, dpi=dpi_resolution)
    plt.close()

After Change

    with open(
        pkg_resources.resource_filename("pynets", "runconfig.yaml"), "r"
    ) as stream:
        hardcoded_params = yaml.load(stream)
        try:
            labeling_atlas = hardcoded_params["plotting"]["labeling_atlas"][0]
        except KeyError:
            print(
                "ERROR: Plotting configuration not successfully extracted from"
                " runconfig.yaml"
            )
            sys.exit(0)
    stream.close()

    labels = [i[0][labeling_atlas] for i in labels]

    try:
        plot_matrix(
            conn_matrix_plt,

Instances