3108bf444028e7ab929f78da794f680aa84c2782,pynets/registration/register.py,DmriReg,gen_tissue,#DmriReg#,343

Before Change

        self.mask.to_filename(self.t1w_brain_mask)

        // Extract wm edge
        cmd = "fslmaths " + self.wm_mask_thr + " -edge -bin -mas " + self.wm_mask_thr + " " + self.wm_edge
        os.system(cmd)

        return

    def t1w2dwi_align(self):

After Change

        mask.to_filename(self.t1w_brain_mask)

        // Extract wm edge
        os.system("fslmaths {} -edge -bin -mas {} {}".format(self.wm_mask_thr, self.wm_mask_thr, self.wm_edge))

        return

    def t1w2dwi_align(self):

Instances