dff5c2d7fba9981f06bebd91e7424c7e331f7c47,skbio/sequence/tests/test_sequence.py,TestSequence,test_init_from_sequence_object,#TestSequence#,110

Before Change

        self.assertEqual(Sequence(seq), seq)

        // sequence with metadata should have everything propagated
        seq = Sequence("ACGT", id="foo", description="bar baz",
                       quality=range(4))
        self.assertEqual(Sequence(seq), seq)

        // should be able to override metadata
        self.assertEqual(

After Change

        self.assertEqual(SequenceNew(seq), seq)

        // sequence with metadata should have everything propagated
        seq = SequenceNew("ACGT", metadata={"id":"foo", "description":"bar baz"},
                       positional_metadata={"quality": range(4)})
        self.assertEqual(SequenceNew(seq), seq)

        // should be able to override metadata
        self.assertEqual(
            SequenceNew(seq, metadata={"id":"abc", "description":"123"},
                     positional_metadata={"quality":[42] * 4}),
            SequenceNew("ACGT", metadata={"id":"abc", "description":"123"},
                     positional_metadata={"quality":[42] * 4}))

        // subclasses work too
        seq = SequenceSubclassNew("ACGT", metadata={"id":"foo", "description":"bar baz"},
                       positional_metadata={"quality": range(4)})
        self.assertEqual(
            SequenceNew(seq),

Instances