f89f84b01139ae264d04172036a023c949ece4db,nucleus/util/ranges.py,,bed_parser,#Any#,353

Before Change

  Yields:
    nucleus.genomics.v1.Range protobuf objects.
  
  for line in fd:
    parts = line.split("\t")
    yield make_range(parts[0], int(parts[1]), int(parts[2]))


def from_regions(regions, contig_map=None):
  Parses each region of `regions` into a Range proto.

  This function provides a super high-level interface for

After Change

    nucleus.genomics.v1.Range protobuf objects.
  
  with bed.BedReader(filename) as fin:
    for r in fin.iterate():
      yield make_range(r.reference_name, r.start, r.end)


def from_regions(regions, contig_map=None):
  Parses each region of `regions` into a Range proto.

  This function provides a super high-level interface for

Instances