cd96a249969eb66243bf45c4d5def8b5800a28f0,umap/aligned_umap.py,AlignedUMAP,fit,#AlignedUMAP#Any#Any#,277

Before Change


        window_size = fit_params.get("window_size", self.alignment_window_size)
        relations = expand_relations(self.dict_relations_, window_size)
        regularisation_weights = build_neighborhood_similarities(
            [mapper.graph_.indptr for mapper in self.mappers_],
            [mapper.graph_.indices for mapper in self.mappers_],
            relations,
        )
        first_init = spectral_layout(

After Change



        indptr_list = numba.typed.List.empty_list(numba.types.int32[::1])
        indices_list = numba.typed.List.empty_list(numba.types.int32[::1])
        heads = numba.typed.List.empty_list(numba.types.int32[::1])
        tails = numba.typed.List.empty_list(numba.types.int32[::1])
        epochs_per_samples = numba.typed.List.empty_list(numba.types.float64[::1])

        for mapper in self.mappers_:
            indptr_list.append(mapper.graph_.indptr)
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 3

Non-data size: 16

Instances


Project Name: lmcinnes/umap
Commit Name: cd96a249969eb66243bf45c4d5def8b5800a28f0
Time: 2020-03-16
Author: leland.mcinnes@gmail.com
File Name: umap/aligned_umap.py
Class Name: AlignedUMAP
Method Name: fit


Project Name: lmcinnes/umap
Commit Name: bbaafb6df702636fed35dc7e91099e8dffb534f3
Time: 2020-03-17
Author: leland.mcinnes@gmail.com
File Name: umap/aligned_umap.py
Class Name: AlignedUMAP
Method Name: update


Project Name: lmcinnes/umap
Commit Name: cd96a249969eb66243bf45c4d5def8b5800a28f0
Time: 2020-03-16
Author: leland.mcinnes@gmail.com
File Name: umap/layouts.py
Class Name:
Method Name: optimize_layout_aligned_euclidean