123e51b8a8708cf105eb0f0c8f268d1e087e712e,src/pyscenic/genesig.py,Regulon,union,#Regulon#Any#,335

Before Change

    def union(self, other: Type["GeneSignature"]) -> "Regulon":
        assert self.nomenclature == other.nomenclature, "Union of gene signatures is only possible when both signatures use same nomenclature for genes."
        assert self.transcription_factor == getattr(other, "transcription_factor", self.transcription_factor), "Union of two regulons is only possible when same factor."
        return Regulon(name="({} | {})".format(self.name, other.name) if self.name != other.name else self.name,
                             nomenclature=self.nomenclature,
                             transcription_factor=self.transcription_factor,
                             context=self.context.union(getattr(other, "context", frozenset())),
                             score=max(self.score, getattr(other, "score", 0.0)),
                             gene2weight=self._union_impl(other))


    def difference(self, other: Type["GeneSignature"]) -> "Regulon":
        assert self.nomenclature == other.nomenclature, "Difference of gene signatures is only possible when both signatures use same nomenclature for genes."

After Change

        assert self.transcription_factor == getattr(other, "transcription_factor", self.transcription_factor), \
            "Union of two regulons is only possible when same factor."
        // noinspection PyTypeChecker
        return super().union(other).copy(
                        context=self.context.union(getattr(other, "context", frozenset())),
                        score=max(self.score, getattr(other, "score", 0.0)))

    def difference(self, other: Type["GeneSignature"]) -> "Regulon":
        assert self.transcription_factor == getattr(other, "transcription_factor", self.transcription_factor), \
            "Difference of two regulons is only possible when same factor."

Instances