23a07e8601cbdba5ece453864bc6d11e3431543e,dipy/workflows/tests/test_align.py,,test_slr_flow,#,42

Before Change

    with TemporaryDirectory() as out_dir:
        data_path = get_fnames("fornix")

        streams, hdr = nib.trackvis.read(data_path)
        fornix = [s[0] for s in streams]

        f = Streamlines(fornix)
        f1 = f.copy()

After Change

    with TemporaryDirectory() as out_dir:
        data_path = get_fnames("fornix")

        data_path = get_fnames("fornix")
        fornix = load_tractogram(data_path, "same",
                                  bbox_valid_check=False).get_streamlines()

        f = Streamlines(fornix)
        f1 = f.copy()

        f1_path = pjoin(out_dir, "f1.trk")
        sft = StatefulTractogram(f1, data_path, Space.RASMM)
        save_tractogram(sft, f1_path, bbox_valid_check=False)

        f2 = f1.copy()
        f2._data += np.array([50, 0, 0])

        f2_path = pjoin(out_dir, "f2.trk")
        sft = StatefulTractogram(f2, data_path, Space.RASMM)
        save_tractogram(sft, f2_path, bbox_valid_check=False)

        slr_flow = SlrWithQbxFlow(force=True)
        slr_flow.run(f1_path, f2_path)

Instances