dae1204ada3d000ce96e3616af7b60b6a16f9a18,pynets/core/thresholding.py,,thresh_func,#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#,859
 
Before Change
        node_size = "parc"
    if np.count_nonzero(conn_matrix) == 0:
        raise ValueError("Raw connectivity matrix contains only"
                         " zeros.")
    // Save unthresholded
    utils.save_mat(
        conn_matrix,
After Change
    from pynets.core import utils, thresholding
    if np.count_nonzero(conn_matrix) == 0:
        print(UserWarning("Raw connectivity matrix contains only"
                         " zeros."))
    [thr_type, edge_threshold, conn_matrix_thr] = \
        thresholding.perform_thresholding(

In pattern: SUPERPATTERN
Frequency: 4
Non-data size: 2
Instances
 Project Name: dPys/PyNets
 Commit Name: dae1204ada3d000ce96e3616af7b60b6a16f9a18
 Time: 2020-11-19
 Author: dpisner@utexas.edu
 File Name: pynets/core/thresholding.py
 Class Name: 
 Method Name: thresh_func
 Project Name: dPys/PyNets
 Commit Name: dae1204ada3d000ce96e3616af7b60b6a16f9a18
 Time: 2020-11-19
 Author: dpisner@utexas.edu
 File Name: pynets/core/thresholding.py
 Class Name: 
 Method Name: thresh_struct
 Project Name: markovmodel/PyEMMA
 Commit Name: f4f78984eda245aa023870d4631b733b406e082f
 Time: 2018-07-27
 Author: m.scherer@fu-berlin.de
 File Name: pyemma/msm/estimators/bayesian_hmsm.py
 Class Name: BayesianHMSM
 Method Name: _estimate
 Project Name: dPys/PyNets
 Commit Name: 3507c7d8d500e2c7e20572136b1549e16ccb5082
 Time: 2018-06-25
 Author: dpisner@utexas.edu
 File Name: pynets/utils.py
 Class Name: 
 Method Name: collect_pandas_df