9a8901f72fa93fe0bb5f60ca47161fe9622c0189,doc/examples/scripts/structure/pb_alignment.py,,,#,49

Before Change


// Fetch animal lysoyzme structures
lyso_files = rcsb.fetch(
    ["1REX", "1AKI", "1DKJ", "1GD6"],
    format="mmtf", target_path=biotite.temp_dir()
)
organisms = ["H. sapiens", "G. gallus", "C. viginianus", "B. mori"]

// Create a PB sequence from each structure

After Change


// Fetch animal lysoyzme structures
lyso_files = rcsb.fetch(
    ["1REX", "1AKI", "1DKJ", "1GD6"],
    format="mmtf", target_path=gettempdir()
)
organisms = ["H. sapiens", "G. gallus", "C. viginianus", "B. mori"]

// Create a PB sequence from each structure
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 4

Non-data size: 3

Instances


Project Name: biotite-dev/biotite
Commit Name: 9a8901f72fa93fe0bb5f60ca47161fe9622c0189
Time: 2020-04-23
Author: patrick.kunzm@gmail.com
File Name: doc/examples/scripts/structure/pb_alignment.py
Class Name:
Method Name:


Project Name: biotite-dev/biotite
Commit Name: 8cb7809825da7a527eb81c87d3c79a99e3398f57
Time: 2020-04-23
Author: patrick.kunzm@gmail.com
File Name: doc/examples/scripts/structure/diameter.py
Class Name:
Method Name: get_diameter


Project Name: biotite-dev/biotite
Commit Name: 9a8901f72fa93fe0bb5f60ca47161fe9622c0189
Time: 2020-04-23
Author: patrick.kunzm@gmail.com
File Name: doc/examples/scripts/structure/gap_bars.py
Class Name:
Method Name: plot_gaps


Project Name: biotite-dev/biotite
Commit Name: 9a8901f72fa93fe0bb5f60ca47161fe9622c0189
Time: 2020-04-23
Author: patrick.kunzm@gmail.com
File Name: doc/examples/scripts/structure/ramachandran.py
Class Name:
Method Name: