011baffb01f3d8c07810c7aae50202b5b45fe8c1,src/biotite/structure/compare.py,,_sq_euclidian,#Any#Any#,120
Before Change
returned.
In this case the first dimension indexes the AtomArray.
if type(reference) != AtomArray:
raise ValueError("Reference must be AtomArray")
dif = subject.coord - reference.coord
return vector_dot(dif, dif)
After Change
returned.
In this case the first dimension indexes the AtomArray.
reference_coord = coord(reference)
subject_coord = coord(subject)
if reference_coord.ndim != 2:
raise TypeError(
"Expected an AtomArray or an ndarray with shape (n,3) as reference"
In pattern: SUPERPATTERN
Frequency: 3
Non-data size: 3
Instances Project Name: biotite-dev/biotite
Commit Name: 011baffb01f3d8c07810c7aae50202b5b45fe8c1
Time: 2019-10-10
Author: patrick.kunzm@gmail.com
File Name: src/biotite/structure/compare.py
Class Name:
Method Name: _sq_euclidian
Project Name: biotite-dev/biotite
Commit Name: 488648668508037f84a6ac91017ba2daca223d54
Time: 2019-11-26
Author: patrick.kunzm@gmail.com
File Name: src/biotite/structure/transform.py
Class Name:
Method Name: rotate
Project Name: biotite-dev/biotite
Commit Name: a018813b84abfe68d1d2514fc123df07560002ae
Time: 2019-02-07
Author: patrick.kunzm@gmail.com
File Name: src/biotite/structure/rdf.py
Class Name:
Method Name: rdf