ac50e56fb49145114d6dfd88318f75dcf6764491,pyemma/coordinates/clustering/regspace.py,RegularSpaceClustering,_estimate,#RegularSpaceClustering#Any#,126

Before Change

        from ._ext import regspace, MaxCentersReachedException
        self._inst = regspace.Regspace_f(self.dmin, self.max_centers, self.metric, iterable.ndim)
        try:
            with iterable.iterator(return_trajindex=False, stride=self.stride,
                                   chunk=self.chunksize, skip=self.skip) as it:
                for X in it:
                    used_frames += len(X)
                    self._inst.cluster(X.astype(np.float32, order="C", copy=False),

After Change

        used_frames = 0
        from ._ext import regspace, MaxCentersReachedException
        self._inst = regspace.Regspace_f(self.dmin, self.max_centers, self.metric, iterable.ndim)
        it = iterable.iterator(return_trajindex=False, stride=self.stride,
                               chunk=self.chunksize, skip=self.skip)
        try:
            with it:
                for X in it:
                    used_frames += len(X)

Instances