475722f1825d7c54fd27fb42723874ecc30b8f5d,cellprofiler/modules/reassignobjectnumbers.py,,copy_labels,#Any#Any#,495

Before Change

    max_labels = np.max(labels)
    labels_new = segmented+max_labels
    labels_new[segmented==0] = labels[segmented==0]
    unique_labels = np.unique(labels_new)
    new_indexes = np.zeros(np.max(unique_labels)+1,int)
    new_indexes[unique_labels] = np.arange(len(unique_labels))+1
    labels_new = new_indexes[labels_new]
    return labels_new

After Change

    segmented - the newly numbered labels matrix (a subset of pixels are labeled)
    """
    max_labels = np.max(segmented)
    seglabel = scind.minimum(labels, segmented, np.arange(1, max_labels+1))
    labels_new = labels.copy()
    labels_new[segmented != 0] = seglabel[segmented[segmented != 0] - 1]
    return labels_new

Instances