7535681ad4fbc592fc83682f93c6786b51fd66f7,ldsc/jackknife.py,Gencov,__init__,#Gencov#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#Any#,384

Before Change

		
		self._jknife = LstsqJackknife(x, y, block_size)
		self.autocor = self._jknife.autocor(1)
		self.gencov_cov = np.multiply(np.square(self.M), self._jknife.jknife_cov)
		self.cat_gencov = np.multiply(self.M, self._jknife.est[0:self.n_annot])
		self.cat_gencov_se = np.multiply(self.M, self._jknife.jknife_se[0:self.n_annot])
		self.intercept = self._jknife.est[self.n_annot]

After Change

		self.intercept = self._jknife.est[0,self.n_annot]
		self.intercept_se = self._jknife.jknife_se[0,self.n_annot]
		self.tot_gencov = np.sum(self.cat_gencov)
		self.tot_gencov_se = np.sqrt(np.sum(M*self._jknife.jknife_cov[0:self.n_annot,\
			0:self.n_annot]*self.M.T))
		
		self.prop_gencov = self.cat_gencov / self.tot_gencov
		self.M_prop = self.M / self.M_tot

Instances