fa662d348e088ad1709f554aa5268e7a774a0fe8,cnvlib/antitarget.py,,get_background,#Any#Any#Any#Any#,13

Before Change

        - Divide into equal-size (region_size/avg_bin_size) portions
        - Emit the (chrom, start, end) coords of each portion
    
    target_chroms = group_coords(ngfrills.parse_regions(target_bed, True))
    if access_bed:
        // Chromosome accessible sequence regions are given -- use them
        access_chroms = group_coords(ngfrills.parse_regions(access_bed, True))

After Change

        - Divide into equal-size (region_size/avg_bin_size) portions
        - Emit the (chrom, start, end) coords of each portion
    
    target_chroms = group_coords(RA.read(target_bed).coords())
    if access_bed:
        // Chromosome accessible sequence regions are given -- use them
        access_chroms = group_coords(RA.read(access_bed).coords())

Instances