59345529cf7663dc4e2b491c483ca47dd50567a4,foreman/data_refinery_foreman/foreman/management/commands/create_compendia.py,Command,handle,#Command#,69

Before Change

        with enough microarray samples except for human and mouse.
        
        if options["organisms"] is None:
            all_organisms = Organism.objects.exclude(name__in=["HOMO_SAPIENS", "MUS_MUSCULUS"])
        else:
            organisms = options["organisms"].upper().replace(" ", "_").split(",")
            all_organisms = Organism.objects.filter(name__in=organisms)

After Change

        // only include organisms with QN targets. We"ll merge groups later.
        all_organisms = Organism.objects.all().filter(qn_target__isnull=False)
        if options["organisms"] is None:
            all_organisms = all_organisms.exclude(name__in=["HOMO_SAPIENS", "MUS_MUSCULUS"])
        else:
            organisms = options["organisms"].upper().replace(" ", "_").split(",")
            all_organisms = all_organisms.filter(name__in=organisms)

Instances