12a88bb285991a83f72be9fec145b9dab4631dce,skbio/stats/tests/test_composition.py,CompositionTests,test_clr,#CompositionTests#,127
Before Change
npt.assert_allclose(cmat,
np.log(A / np.exp(np.log(A).mean())))
cmat = clr(_closure(self.data6))
A = np.array([.2, .2, .6])
B = np.array([.4, .4, .2])
After Change
npt.assert_allclose(cmat,
np.log(A / np.exp(np.log(A).mean())))
cmat = clr(_closure(self.data5))
A = np.array([.2, .2, .6])
B = np.array([.4, .4, .2])
In pattern: SUPERPATTERN
Frequency: 3
Non-data size: 3
Instances
Project Name: biocore/scikit-bio
Commit Name: 12a88bb285991a83f72be9fec145b9dab4631dce
Time: 2015-03-12
Author: jamietmorton@gmail.com
File Name: skbio/stats/tests/test_composition.py
Class Name: CompositionTests
Method Name: test_clr
Project Name: biocore/scikit-bio
Commit Name: 12a88bb285991a83f72be9fec145b9dab4631dce
Time: 2015-03-12
Author: jamietmorton@gmail.com
File Name: skbio/stats/tests/test_composition.py
Class Name: CompositionTests
Method Name: test_centralize
Project Name: biocore/scikit-bio
Commit Name: 12a88bb285991a83f72be9fec145b9dab4631dce
Time: 2015-03-12
Author: jamietmorton@gmail.com
File Name: skbio/stats/tests/test_composition.py
Class Name: CompositionTests
Method Name: test_closure