8bd52393b1026d2b2e29dc1e102126d48563f3c4,src/biotite/sequence/annotation.py,Annotation,__getitem__,#Annotation#Any#,124

Before Change

                        in_scope = True
                    ////// Handle defects //////
                if in_scope:
                    sub_annot.add_feature(feature.copy())
            return sub_annot            
        else:
            raise TypeError("{:} instances are invalid Annotation indices"
                            .format(type(index).__name__))

After Change

                if in_scope:
                    // Create copy for new annotation
                    new_feature = feature.copy()
                    for loc in new_feature.locs:
                        // Handle defects
                        if loc.first < i_first:
                            print("test1")
                            loc.defect |= Location.Defect.MISS_LEFT
                            loc.first = i_first
                        if loc.last > i_last:
                            print("test2")
                            loc.defect |= Location.Defect.MISS_RIGHT
                            loc.last = i_last
                    sub_annot.add_feature(new_feature)
            return sub_annot            
        else:
            raise TypeError("{:} instances are invalid Annotation indices"

Instances