6d895c6a1f32c982ca3d75929bd0f303a16746d5,pynets/plotting.py,,plot_conn_mat,#Any#Any#Any#,12

Before Change

    dpi_resolution = 500

    conn_matrix = np.array(thresholding.normalize(np.array(thresholding.autofix(conn_matrix))))
    rois_num = conn_matrix.shape[0]
    plt.figure(figsize=(10, 10))
    plt.imshow(conn_matrix, interpolation="nearest", vmax=float(1.0), vmin=float(-1.0), cmap=plt.cm.RdBu_r)

After Change

    conn_matrix = np.array(np.array(thresholding.autofix(conn_matrix)))
    [z_min, z_max] = -np.abs(conn_matrix).max(), np.abs(conn_matrix).max()
    rois_num = conn_matrix.shape[0]
    if rois_num < 100:
        plt.gca().set_xticks(size="xx-small")
        plt.gca().set_yticks(size="xx-small")
        plot_matrix(conn_matrix, figure=(10, 10), label_names=label_names, vmax=z_max*0.8, vmin=z_min*0.8, reorder=True,
                    auto_fit=True, grid=False, colorbar=False)
    else:
        plot_matrix(conn_matrix, figure=(10, 10), vmax=z_max*0.8, vmin=z_min*0.8, auto_fit=True, grid=False,
                    colorbar=False)
    plt.savefig(out_path_fig, dpi=dpi_resolution)
    plt.close()
    return

Instances