0921fc34cbb30d34ab64861c67e6082996d665fa,prody/database/dali.py,DaliRecord,filter,#DaliRecord#Any#Any#Any#Any#,354

Before Change


                if not diff_i in missing_ind_dict:
                    missing_ind_dict[diff_i] = 1
                else:
                    missing_ind_dict[diff_i] += 1
        self._missing_ind_dict = missing_ind_dict
        filterList = filterListLen + filterListRMSD + filterListZ + filterListIdentiry
        filterDict = {"len": filterListLen, "rmsd": filterListRMSD, "Z": filterListZ, "identity": filterListIdentiry}

After Change


        try:
            daliInfo = self._alignPDB
        except:
            raise AttributeError("Dali Record does not have any data yet. Please run getRecord.")

        pdbListAll = self._pdbListAll
        missing_ind_dict = dict()
        ref_indices_set = set(range(self._max_index))
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 3

Non-data size: 3

Instances


Project Name: prody/ProDy
Commit Name: 0921fc34cbb30d34ab64861c67e6082996d665fa
Time: 2020-04-21
Author: jamesmkrieger@gmail.com
File Name: prody/database/dali.py
Class Name: DaliRecord
Method Name: filter


Project Name: Featuretools/featuretools
Commit Name: 88429bfe56ad2103df596ae2c2c982eafdad32a3
Time: 2020-05-20
Author: 4307001+thehomebrewnerd@users.noreply.github.com
File Name: featuretools/computational_backends/calculate_feature_matrix.py
Class Name:
Method Name: calculate_feature_matrix


Project Name: arviz-devs/arviz
Commit Name: 0a0f18dbd8017c4f8e5f64af66c7a1bbb0cf643f
Time: 2020-02-26
Author: pasrichanitish2@gmail.com
File Name: arviz/data/io_pymc3.py
Class Name: PyMC3Converter
Method Name: _extract_log_likelihood