0921fc34cbb30d34ab64861c67e6082996d665fa,prody/database/dali.py,DaliRecord,filter,#DaliRecord#Any#Any#Any#Any#,354
Before Change
if not diff_i in missing_ind_dict:
missing_ind_dict[diff_i] = 1
else:
missing_ind_dict[diff_i] += 1
self._missing_ind_dict = missing_ind_dict
filterList = filterListLen + filterListRMSD + filterListZ + filterListIdentiry
filterDict = {"len": filterListLen, "rmsd": filterListRMSD, "Z": filterListZ, "identity": filterListIdentiry}
After Change
try:
daliInfo = self._alignPDB
except:
raise AttributeError("Dali Record does not have any data yet. Please run getRecord.")
pdbListAll = self._pdbListAll
missing_ind_dict = dict()
ref_indices_set = set(range(self._max_index))
In pattern: SUPERPATTERN
Frequency: 3
Non-data size: 3
Instances
Project Name: prody/ProDy
Commit Name: 0921fc34cbb30d34ab64861c67e6082996d665fa
Time: 2020-04-21
Author: jamesmkrieger@gmail.com
File Name: prody/database/dali.py
Class Name: DaliRecord
Method Name: filter
Project Name: Featuretools/featuretools
Commit Name: 88429bfe56ad2103df596ae2c2c982eafdad32a3
Time: 2020-05-20
Author: 4307001+thehomebrewnerd@users.noreply.github.com
File Name: featuretools/computational_backends/calculate_feature_matrix.py
Class Name:
Method Name: calculate_feature_matrix
Project Name: arviz-devs/arviz
Commit Name: 0a0f18dbd8017c4f8e5f64af66c7a1bbb0cf643f
Time: 2020-02-26
Author: pasrichanitish2@gmail.com
File Name: arviz/data/io_pymc3.py
Class Name: PyMC3Converter
Method Name: _extract_log_likelihood