6372bff538de67595fda0183964a8df4b9b105fb,cnvlib/antitarget.py,,get_background,#Any#Any#Any#Any#,13

Before Change

    backgrounds = find_background_regions(access_chroms, target_chroms,
                                          2 * INSERT_SIZE)
    bg_arr = GA.from_rows(backgrounds)
    bg_arr = bg_arr.subdivide(avg_bin_size, min_bin_size)
    bg_arr["gene"] = "Background"
    return bg_arr

After Change

            logging.info("Skipping untargeted chromosomes %s",
                         " ".join(sorted(chroms_to_skip)))
            skip_idx = accessible.chromosome.isin(chroms_to_skip)
            accessible = accessible[~skip_idx]
    else:
        // Chromosome accessible sequence regions not known -- use heuristics
        // (chromosome length is endpoint of last probe; skip initial
        // <magic number> of bases that are probably telomeric)

Instances