ce4a5ca7cab1ea4ae421fbcd3b28205b1e18158d,deepchem/models/tests/test_overfit.py,TestOverfitAPI,test_tf_multitask_regression_overfit,#TestOverfitAPI#,787
Before Change
def test_tf_multitask_regression_overfit(self):
Test tf multitask overfits tiny data.
n_tasks = 10
tasks = ["task%d" % task for task in range(n_tasks)]
task_types = {task: "regression" for task in tasks}
n_samples = 10
n_features = 3
After Change
verbosity = "high"
regression_metric = Metric(metrics.mean_squared_error, verbosity=verbosity,
task_averager=np.mean, mode="regression")
tensorflow_model = TensorflowMultiTaskRegressor(
n_tasks, n_features, self.model_dir, dropouts=[0.],
learning_rate=0.0003, weight_init_stddevs=[.1],
batch_size=n_samples, verbosity=verbosity)
model = TensorflowModel(tensorflow_model, self.model_dir)
// Fit trained model
model.fit(dataset, nb_epoch=50)
model.save()
In pattern: SUPERPATTERN
Frequency: 4
Non-data size: 4
Instances
Project Name: deepchem/deepchem
Commit Name: ce4a5ca7cab1ea4ae421fbcd3b28205b1e18158d
Time: 2016-09-19
Author: bharath.ramsundar@gmail.com
File Name: deepchem/models/tests/test_overfit.py
Class Name: TestOverfitAPI
Method Name: test_tf_multitask_regression_overfit
Project Name: deepchem/deepchem
Commit Name: ce4a5ca7cab1ea4ae421fbcd3b28205b1e18158d
Time: 2016-09-19
Author: bharath.ramsundar@gmail.com
File Name: deepchem/models/tests/test_overfit.py
Class Name: TestOverfitAPI
Method Name: test_tf_skewed_missing_classification_overfit
Project Name: deepchem/deepchem
Commit Name: ce4a5ca7cab1ea4ae421fbcd3b28205b1e18158d
Time: 2016-09-19
Author: bharath.ramsundar@gmail.com
File Name: deepchem/models/tests/test_overfit.py
Class Name: TestOverfitAPI
Method Name: test_tf_multitask_classification_overfit
Project Name: deepchem/deepchem
Commit Name: ce4a5ca7cab1ea4ae421fbcd3b28205b1e18158d
Time: 2016-09-19
Author: bharath.ramsundar@gmail.com
File Name: deepchem/models/tests/test_overfit.py
Class Name: TestOverfitAPI
Method Name: test_tf_classification_overfit