e45f87362f4c58bde3a65df7a2022b543bd669bb,anvio/taxoestimation.py,SCGsTaxonomy,estimate_taxonomy_for_metagenome,#SCGsTaxonomy#,732

Before Change

        if len(estimate_taxonomy_presences)>1:
            for estimate_taxonomy_presence in estimate_taxonomy_presences:
                output+=[[self.db_path.replace(".db","")+"_genome_"+str(num_metagenome)]+list(estimate_taxonomy_presence.values())+[dictonnary_number_appear[list(estimate_taxonomy_presence.values())[-1]]]]
                num_metagenome+=1
        else:
            output+=[[self.db_path.replace(".db","")]+list(estimate_taxonomy_presence.values())]
        

After Change

                    dictonnary_number_appear[level]+=1
        print(dictonarry_presence)

        print(dictonnary_number_appear)
        if len(estimate_taxonomy_presences)>1:
            for estimate_taxonomy_presence in estimate_taxonomy_presences:
                print(len(dictonarry_presence[list(estimate_taxonomy_presence.values())[-1]].values()))
                //output+=[[self.db_path.replace(".db","")+"_genome_"+str(num_metagenome)]+list(estimate_taxonomy_presence.values())+[len(dictonarry_presence[list(estimate_taxonomy_presence.values())[-1]].values()]

Instances