52bdab14484a69594976e84afc70a0790f679588,pynets/registration/register.py,DmriReg,tissue2dwi_align,#DmriReg#,577

Before Change

        // Threshold GM to binary in dwi space
        thr_img = nib.load(self.gm_in_dwi)
        np.asarray(thr_img.dataobj)[np.asarray(thr_img.dataobj) < 0.2] = 0
        nib.save(thr_img, self.gm_in_dwi_bin)

        // Threshold CSF to binary in dwi space

After Change

        // Threshold WM to binary in dwi space
        thr_img = nib.load(self.wm_in_dwi)
        thr_img = math_img("img > 0.1", img=thr_img)
        nib.save(thr_img, self.wm_in_dwi_bin)

        // Threshold GM to binary in dwi space
        thr_img = nib.load(self.gm_in_dwi)

Instances