98b1fe8f5c1acccb31c10028bccaa797470279d2,bin/basenji_map.py,,main,#,47

Before Change

    options.target_indexes = [int(ti) for ti in options.target_indexes.split(",")]
    target_subset = options.target_indexes
  else:
    options.target_indexes = list(range(job["num_targets"]))
    target_subset = None

  // build model
  model = seqnn.SeqNN()

After Change

    target_indexes = targets_df.index
    target_subset = target_indexes
  else:
    if gene_data.num_targets is None:
      print("No targets to test against.", file=sys.stderr)
      exit(1)
    else:
      target_indexes = np.arange(gene_data.num_targets)
      target_subset = None

  // build model
  model = seqnn.SeqNN()
  model.build_feed(job, target_subset=target_subset)

  // determine latest pre-dilated layer

Instances