9355ea209c2664ee3c2565431f50b960816ea59a,prody/proteins/pdbclusters.py,,listPDBCluster,#Any#Any#Any#,63

Before Change

    pdb_ch = pdb.upper() + "_" + ch.upper()
    index = clusters.index(pdb_ch)
    maxlen = clusters.index("\n")
    end = clusters.find("\n", index)
    start = clusters.rfind("\n", index-maxlen, end)+1
    cluster = clusters[start:end]
    return [tuple(item.split("_")) for item in cluster.split()]

def fetchPDBClusters(sqid=None):

After Change

        clusters = PDB_CLUSTERS[sqid]
    pdb_ch = (pdb.upper(), ch)

    for cluster in clusters:
        if pdb_ch in cluster:
            return cluster
    return 

def fetchPDBClusters(sqid=None):
    Retrieve PDB sequence clusters.  PDB sequence clusters are results of

Instances