06cd615e6c10e4fc7ebf9b7df3bbfbb74e6c9ac3,pynets/registration/reg_utils.py,,wm_syn,#Any#Any#Any#,247

Before Change

    regtools.overlay_slices(static, warped_moving, None, 1, "Static", "Moving",
                            "%s%s" % (working_dir, "/transformed_coronal.png"))
    regtools.overlay_slices(static, warped_moving, None, 2, "Static", "Moving",
                            "%s%s" % (working_dir, "/transformed_axial.png"))

    return mapping, affine_map, warped_fa

After Change

    warped_moving = mapping.transform(moving)

    // Save warped FA image
    run_uuid = "%s_%s" % (strftime("%Y%m%d_%H%M%S"), uuid.uuid4())
    warped_fa = "{}/warped_fa_{}.nii.gz".format(working_dir, run_uuid)
    nib.save(nib.Nifti1Image(warped_moving, affine=static_affine), warped_fa)

    // We show the registration result with:
    regtools.overlay_slices(static, warped_moving, None, 0, "Static", "Moving",
                            "%s%s%s%s" % (working_dir, "/transformed_sagittal_", run_uuid, ".png"))
    regtools.overlay_slices(static, warped_moving, None, 1, "Static", "Moving",
                            "%s%s%s%s" % (working_dir, "/transformed_coronal_", run_uuid, ".png"))
    regtools.overlay_slices(static, warped_moving, None, 2, "Static", "Moving",

Instances