38ad6b4e89c7d1c7599c3b07ba5938d0f87904ab,scanpy/plotting/preprocessing.py,,filter_genes_dispersion,#Any#Any#Any#Any#,11

Before Change

            y_min = 0.95*min_dispersion if min_dispersion > 0 else 1e-1
            pl.xlim(0.95*np.min(means), 1.05*np.max(means))
            pl.ylim(y_min, 1.05*np.max(dispersions))
        pl.legend()
        pl.xlabel(("$log_{10}$ " if False else "") + "mean expression of gene")

        file_name = "filter_genes_dispersion{}".format("_normalized" if id == 0 else "")
        pl.ylabel(("$log_{10}$ " if False else "") + "dispersion of gene"

After Change

            y_min = 0.95*min_dispersion if min_dispersion > 0 else 1e-1
            pl.xlim(0.95*np.min(means), 1.05*np.max(means))
            pl.ylim(y_min, 1.05*np.max(dispersions))
        if idx == 0: pl.legend()
        pl.xlabel(("$log_{10}$ " if False else "") + "mean expressions of genes")
        pl.ylabel(("$log_{10}$ " if False else "") + "dispersions of genes"
                  + (" (normalized)" if idx == 0 else " (not normalized)"))
    utils.savefig_or_show("filter_genes_dispersion", show=show, save=save)

Instances