749855e9d1b5bd1aa7b46db144503922fbc0a336,doc/examples/brain_extraction_dwi.py,,,#,8

Before Change

fetch_scil_b0()

dipy_home = pjoin(os.path.expanduser("~"), ".dipy")
files = [dipy_home+"/datasets_multi-site_all_companies/3T/GE/b0.nii.gz", 
         dipy_home+"/datasets_multi-site_all_companies/3T/Siemens/b0.nii.gz", 
         dipy_home+"/datasets_multi-site_all_companies/3T/Philips/b0.nii.gz",
         dipy_home+"/datasets_multi-site_all_companies/1.5T/GE/b0.nii.gz", 
         dipy_home+"/datasets_multi-site_all_companies/1.5T/Siemens/b0.nii.gz",
         dipy_home+"/datasets_multi-site_all_companies/Stanford/b0.nii.gz"]

for f in files :
    print(f)
    img = nib.load(f)

After Change

plt.figure("Brain segmentation")
plt.subplot(1,2,1)
plt.imshow(data[:,:,slice])
plt.subplot(1,2,2)
plt.imshow(b0_mask[:,:,slice])
plt.show()

Instances