b9e5bdd6e23ee782268b7f36e68fe23dd3bba4c5,pynets/registration/reg_utils.py,,match_target_vox_res,#Any#Any#Any#Any#,546

Before Change

        data2, affine2 = reslice(data, affine, zooms, new_zooms)

        // Resize FOV if voxels were non-isotropic
        scale_factor = np.array(zooms) / np.array(new_zooms)
        affine2[:3, 3] = affine2[:3, 3].dot(np.diag(scale_factor/stats.mode(scale_factor)[0][0]))
        img2 = nib.Nifti1Image(data2, affine=affine2)
        img2 = normalize_xform(img2)
        nib.save(img2, img_file_res)

After Change

        nib.save(img2, img_file_res)
        img_file = img_file_res
    else:
        img_file_nores = "%s%s%s%s" % (out_dir, "/", os.path.basename(img_file).split(".nii.gz")[0], "_nores.nii.gz")
        img2 = normalize_xform(img)
        nib.save(img2, img_file_nores)
        img_file = img_file_nores

Instances