c5c2d65ebd3ee375fa9855c326d88646ee403aa7,scanpy/get.py,,obs_df,#,70
Before Change
elif use_raw:
matrix = adata.raw[:, var_names].X
else:
matrix = adata[:, var_names].X
from scipy.sparse import issparse
After Change
// prepare var values
if len(var_names) > 0:
X = _get_obs_rep(adata, layer=layer, use_raw=use_raw)
matrix = X[:, adata.var_names.get_indexer(var_names)]
df_var = pd.DataFrame(matrix, columns=var_symbol, index=adata.obs.index)
// prepare obs values
In pattern: SUPERPATTERN
Frequency: 3
Non-data size: 4
Instances
Project Name: theislab/scanpy
Commit Name: c5c2d65ebd3ee375fa9855c326d88646ee403aa7
Time: 2020-12-03
Author: fidel.ramirez@gmail.com
File Name: scanpy/get.py
Class Name:
Method Name: obs_df
Project Name: theislab/scanpy
Commit Name: 5a4260be766333d81bddbb0fa5fd591fc78bd763
Time: 2020-12-03
Author: fidel.ramirez@gmail.com
File Name: scanpy/get.py
Class Name:
Method Name: var_df
Project Name: theislab/scanpy
Commit Name: 2bbca4b5e1d6dafa223d9d643975cdc33ab03f7a
Time: 2020-12-03
Author: fidel.ramirez@gmail.com
File Name: scanpy/get.py
Class Name:
Method Name: obs_df