52ae438ada955209e14c9c86ba56e3c81347930e,skbio/math/stats/distance/_mantel.py,,mantel,#Any#Any#Any#Any#Any#,16

Before Change

            r = corr_func(x.permute(), y_flat)[0]

            if alternative == "twosided":
                if abs(r) >= abs(orig_stat):
                    better += 1
            else:
                if ((alternative == "greater" and r >= orig_stat) or
                    (alternative == "less" and r <= orig_stat)):
                    better += 1

After Change

            count_better = (np.absolute(permuted_stats) >=
                            np.absolute(orig_stat)).sum()
        elif alternative == "greater":
            count_better = (permuted_stats >= orig_stat).sum()
        else:
            count_better = (permuted_stats <= orig_stat).sum()

        p_value = (count_better + 1) / (permutations + 1)

Instances