3535d18e63a7b90b92dd11dcad06e9a74bb7cce5,common/data_refinery_common/rna_seq.py,,get_quant_files_for_results,#Any#,117

Before Change

    for result in results:
        try:
            quant_files.append(
                ComputedFile.objects.filter(
                    result=result,
                    filename="quant.sf",
                    s3_key__isnull=False,
                    s3_bucket__isnull=False,
                ).order_by("-id")[0]
            )

After Change

    for result in results:
        quant_sf_file = result.get_quant_sf_file()
        if quant_sf_file:
            quant_files.append(quant_sf_file)
        else:
            logger.exception(
                "Salmon quant result found without quant.sf ComputedFile!",
                quant_result=result.id,
                sample=result.samples.first(),
            )
            raise Exception("Salmon quant result found without quant.sf ComputedFile!")

    return quant_files


ENA_DOWNLOAD_URL_TEMPLATE = (

Instances