9e9356fd14e49fd1ab5949768385c5bf6657fa40,foreman/data_refinery_foreman/foreman/management/commands/feed_the_beast.py,Command,handle,#Command#,23

Before Change

                    accession_code = missing_accessions.pop()
                    try:
                        queue_surveyor_for_accession(accession_code)
                        time.sleep(30)
                    except:
                        // We don"t want to stop, gotta keep feeding the beast!!!!
                        logger.exception("Exception caught while looping through all accessions!",
                                         accession_code=accession_code)

After Change

            all_rna_accessions = [line.strip() for line in accession_list_file]

        with open("config/all_microarray_accessions.txt") as accession_list_file:
            all_microarray_accessions = [line.strip() for line in accession_list_file]

        all_accessions = all_microarray_accessions + all_rna_accession

        BATCH_SIZE = 1000
        batch_index = 0
        batch_accessions = all_accessions[0:BATCH_SIZE]

Instances