fdd6fcc21fd42a55f9988681850348e9f8201446,skbio/sequence/tests/test_sequence.py,SequenceInterfaceTests,test___getitem___with_invalid,#SequenceInterfaceTests#,188

Before Change

    def test___getitem___with_invalid(self):
        // This will make a numpy array of equal length
        quality = np.fromstring(self.sample_sequence, dtype=np.uint8)
        seq = self.cls(self.sample_sequence, id="id1",
                        description="description", quality=quality)
        no_quality = self.cls(self.sample_sequence, id="id1",
                              description="description")

        with self.assertRaises(TypeError):

After Change

        no_qual[mask].equals(exp_no_qual, descriptive=True)

    def test___getitem___with_invalid(self):
        Seq, string, qual, max_range = self._getitem_compenents()

        seq = Seq(string, id="idm", description="description", quality=qual)

Instances