eca4aa69416a6088b967cec35fd0d00a9bc8af89,src/biotite/application/dssp/app.py,DsspApp,__init__,#DsspApp#Any#Any#,54

Before Change

        super().__init__(bin_path)
        self._array = atom_array
        self._in_file_name  = temp_file("pdb")
        self._out_file_name = temp_file("pdb")

    def run(self):
        in_file = PDBFile()
        in_file.set_structure(self._array)

After Change

    def __init__(self, atom_array, bin_path="mkdssp"):
        super().__init__(bin_path)
        self._array = atom_array
        self._in_file  = NamedTemporaryFile("w", suffix=".pdb")
        self._out_file = NamedTemporaryFile("r", suffix=".dssp")

    def run(self):
        in_file = PDBFile()

Instances