969c31e8e32bedbaa65f82222cff07e068553bc3,cnvlib/core.py,,sorter_chrom,#Any#,43

Before Change

    
    chrom = (label[3:] if label.lower().startswith("chr")
             else label)
    return (chr(int(chrom)) if chrom.isdigit()
            else chrom)


def sorter_chrom_at(index):
    Create a sort key function that gets chromosome label at a list index.

After Change

    else:
        // Separate numeric and special chromosomes
        nums = "".join(takewhile(str.isdigit, chrom))
        chars = chrom[len(nums):]
        nums = int(nums) if nums else 0
        if not chars:
            key = (nums, "")
        elif len(chars) == 1:
            key = (2000 + nums, chars)
        else:
            key = (3000 + nums, chars)
    return key


def sorter_chrom_at(index):

Instances