6e733983baff8c48de09230197c7b3142a60fdb6,cnvlib/genome/gary.py,GenomicArray,by_ranges,#GenomicArray#Any#Any#Any#,231

Before Change

        
        chrom_lookup = dict(self.by_chromosome())
        for chrom, bin_rows in other.by_chromosome():
            if chrom in chrom_lookup:
                subranges = _iter_ranges(chrom_lookup[chrom].data, None,
                                         bin_rows["start"], bin_rows["end"],
                                         mode)
                for bin_row, subrange in zip(bin_rows, subranges):
                    yield bin_row, self.as_dataframe(subrange)
            else:
                if keep_empty:
                    for bin_row in bin_rows:
                        yield bin_row, self.as_rows([])

    def coords(self, also=()):
        Iterate over plain coordinates of each bin: chromosome, start, end.

        Parameters

After Change

            if len(subrange):
                yield bin_row, self.as_dataframe(subrange)
            elif keep_empty:
                yield bin_row, self.as_rows(subrange)

    def coords(self, also=()):
        Iterate over plain coordinates of each bin: chromosome, start, end.

Instances