9c8304b9f70bc58317f012dd7c9d17e1fb16845c,foreman/data_refinery_foreman/surveyor/management/commands/survey_all.py,Command,handle,#Command#,35
Before Change
continue
accession = accession.strip()
try:
if "GSE" in accession[:3]:
surveyor.survey_geo_experiment(accession)
elif "E-" in accession[:2]:
surveyor.survey_ae_experiment(accession)
elif " " in accession:
surveyor.survey_transcriptome_index(accession)
else:
surveyor.survey_sra_experiment(accession)
except Exception as e:
logger.exception(e)
After Change
if options["accession"]:
accession = options["accession"]
try:
run_surveyor_for_accession(accession)
except Exception as e:
logger.exception(e)
In pattern: SUPERPATTERN
Frequency: 3
Non-data size: 6
Instances
Project Name: AlexsLemonade/refinebio
Commit Name: 9c8304b9f70bc58317f012dd7c9d17e1fb16845c
Time: 2018-06-13
Author: kurt.wheeler91@gmail.com
File Name: foreman/data_refinery_foreman/surveyor/management/commands/survey_all.py
Class Name: Command
Method Name: handle
Project Name: markovmodel/PyEMMA
Commit Name: 641109f7a4d1599bf520581254de01006435d811
Time: 2017-12-18
Author: m.scherer@fu-berlin.de
File Name: pyemma/_base/serialization/serialization.py
Class Name: SerializableMixIn
Method Name: _set_state_from_serializeable_fields_and_state
Project Name: thenetcircle/dino
Commit Name: f06d9bbf420feb41886adbcfbc6207c4fbb6edb0
Time: 2017-06-14
Author: oscar.eriks@gmail.com
File Name: dino/endpoint/queue.py
Class Name: QueueHandler
Method Name: handle_server_activity