d9d7fc75007ed8d9791830cfd72f6d2a5ba3ed3e,scripts/extract_episodes_from_subjects.py,,,#,15

Before Change

parser.add_argument("subjects_root_path", type=str, help="Directory containing subject sub-directories.")
parser.add_argument("--variable_map_file", type=str, default="resources/itemid_to_variable_map.csv",
                    help="CSV containing ITEMID-to-VARIABLE map.")
parser.add_argument("--reference_range_file", type=str, default="resources/variable_ranges.csv",
                    help="CSV containing reference ranges for VARIABLEs.")
parser.add_argument("--verbose", "-v", type=int, help="Level of verbosity in output.", default=1)
args, _ = parser.parse_known_args()

var_map = read_itemid_to_variable_map(args.variable_map_file)

After Change

parser = argparse.ArgumentParser(description="Extract episodes from per-subject data.")
parser.add_argument("subjects_root_path", type=str, help="Directory containing subject sub-directories.")
parser.add_argument("--variable_map_file", type=str,
                    default=os.path.join(os.path.dirname(__file__), "../resources/itemid_to_variable_map.csv"),
                    help="CSV containing ITEMID-to-VARIABLE map.")
parser.add_argument("--reference_range_file", type=str,
                    default=os.path.join(os.path.dirname(__file__), "../resources/variable_ranges.csv"),
                    help="CSV containing reference ranges for VARIABLEs.")
parser.add_argument("--verbose", "-v", type=int, help="Level of verbosity in output.", default=1)
args, _ = parser.parse_known_args()

Instances