4d6bc366a8ffb5bbef83f5a529616f9acaa31a15,skbio/io/format/blast7.py,,_blast7_sniffer,#Any#,363

Before Change


    lines = list(zip(range(3), fh))
    if len(lines) < 3:
        return False, {}
    try:
        if (lines[0][1][:7] == "// BLAST" and
            (lines[1][1][:8] == "// Query:" or
             lines[1][1][:11] == "// Database:") and
            (lines[2][1][:10] == "// Subject:" or
             lines[2][1][:8] == "// Query:" or
             lines[2][1][:11] == "// Database:")):
            return True, {}
        else:
            return False, {}
    except IndexError:
        return False, {}


@blast7.reader(pd.DataFrame, monkey_patch=False)
def _blast7_to_data_frame(fh):
    dtypes = None
    x = 0

After Change



    if not lines[0].startswith("// BLAST"):
        return False, {}
    if not (lines[1].startswith("// Query:") or
            lines[1].startswith("// Database:")):
        return False, {}
    if not (lines[2].startswith("// Subject:") or
            lines[2].startswith("// Query:") or
            lines[2].startswith("// Database:")):
        return False, {}
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 3

Non-data size: 5

Instances


Project Name: biocore/scikit-bio
Commit Name: 4d6bc366a8ffb5bbef83f5a529616f9acaa31a15
Time: 2015-11-04
Author: kestrel.gorlick@gmail.com
File Name: skbio/io/format/blast7.py
Class Name:
Method Name: _blast7_sniffer


Project Name: thenetcircle/dino
Commit Name: 4563e383962690cc196f4551f217d488501b660e
Time: 2019-12-29
Author: oscar.eriks@gmail.com
File Name: bin/count_users_in_rooms.py
Class Name:
Method Name:


Project Name: IDSIA/sacred
Commit Name: 216e20a8ca8e53aa1da7538b242ce29e2d521d7c
Time: 2014-09-25
Author: klaus@idsia.ch
File Name: sacred/commands.py
Class Name:
Method Name: non_unicode_repr