4dd2aa73981648bb9dcd9f7455d2141a1a2adca1,cellprofiler/modules/tile.py,Tile,upgrade_settings,#Tile#Any#Any#Any#Any#,424

Before Change


            horizontal_or_vertical = setting_values[7]
            delete_pipeline = setting_values[8]
            if delete_pipeline == cps.YES:
                sys.stderr.write(
                    "Ignoring memory option when importing PlaceAdjacent "
                    "into Tile. Use the ConserveMemory module to remove "
                    "the image from memory if desired.\n")
            if len(image_names) == 0:
                image_names.append(cps.DO_NOT_USE)
            if horizontal_or_vertical.lower() == "horizontal":
                tile_style = S_ROW

After Change


            horizontal_or_vertical = setting_values[7]
            delete_pipeline = setting_values[8]
            if delete_pipeline == cps.YES:
                logger.warning(
                    "Ignoring memory option when importing PlaceAdjacent "
                    "into Tile. Use the ConserveMemory module to remove "
                    "the image from memory if desired.\n")
            if len(image_names) == 0:
                image_names.append(cps.DO_NOT_USE)
            if horizontal_or_vertical.lower() == "horizontal":
                tile_style = S_ROW
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 6

Non-data size: 5

Instances


Project Name: CellProfiler/CellProfiler
Commit Name: 4dd2aa73981648bb9dcd9f7455d2141a1a2adca1
Time: 2011-05-02
Author: leek@1fc53939-2000-0410-845c-e8453a809027
File Name: cellprofiler/modules/tile.py
Class Name: Tile
Method Name: upgrade_settings


Project Name: deeptools/HiCExplorer
Commit Name: 0b7321b24e7d57372edd48a10845dbe02a9ee3e4
Time: 2017-12-12
Author: wolffj@informatik.uni-freiburg.de
File Name: hicexplorer/hicPlotMatrix.py
Class Name:
Method Name: main


Project Name: deeptools/HiCExplorer
Commit Name: 177c9975b2e7aacd12f775f3219f83554cc13eac
Time: 2018-02-08
Author: wolffj@informatik.uni-freiburg.de
File Name: hicexplorer/hicAggregateContacts.py
Class Name:
Method Name: cluster_matrices


Project Name: deeptools/HiCExplorer
Commit Name: 0b7321b24e7d57372edd48a10845dbe02a9ee3e4
Time: 2017-12-12
Author: wolffj@informatik.uni-freiburg.de
File Name: hicexplorer/hicMergeMatrixBins.py
Class Name:
Method Name: remove_nans_if_needed


Project Name: CellProfiler/CellProfiler
Commit Name: e389ef8e2c282c2e5c431ebd6c9eb3c29d458384
Time: 2011-04-29
Author: leek@1fc53939-2000-0410-845c-e8453a809027
File Name: cellprofiler/modules/flagimage.py
Class Name: FlagImage
Method Name: upgrade_settings


Project Name: deeptools/HiCExplorer
Commit Name: eb01adc81d4e3bd54311bd69e2333e7b92ee2752
Time: 2018-02-09
Author: fidel.ramirez@gmail.com
File Name: hicexplorer/hicAggregateContacts.py
Class Name:
Method Name: cluster_matrices