b260027ffeab426e802f0c4cbe29bfc322f07d2f,brian2/tests/test_spatialneuron.py,,test_infinitecable,#,42

Before Change


    neuron = SpatialNeuron(morphology=morpho, model=eqs, Cm=Cm, Ri=Ri)

    taum = Cm/gL // membrane time constant
    rm = 1/(gL * pi * diameter) // membrane resistance per unit length
    ra = (4 * Ri)/(pi * diameter**2) // axial resistance per unit length
    la = sqrt(rm/ra) // space length

    // Monitors
    mon=StateMonitor(neuron,"v",record=N/2-20)

After Change


    v = mon[N//2-20].v
    // Theory (incorrect near cable ends)
    x = 20*morpho.length[0] * meter
    la = neuron.space_constant[0]
    taum = Cm/gL // membrane time constant
    theory = 1./(la*Cm*pi*diameter)*sqrt(taum/(4*pi*(t+defaultclock.dt)))*\
                 exp(-(t+defaultclock.dt)/taum-taum/(4*(t+defaultclock.dt))*(x/la)**2)
    theory = theory*1*nA*0.02*ms
Italian Trulli
In pattern: SUPERPATTERN

Frequency: 3

Non-data size: 7

Instances


Project Name: brian-team/brian2
Commit Name: b260027ffeab426e802f0c4cbe29bfc322f07d2f
Time: 2014-08-12
Author: romain.brette@ens.fr
File Name: brian2/tests/test_spatialneuron.py
Class Name:
Method Name: test_infinitecable


Project Name: freelunchtheorem/Conditional_Density_Estimation
Commit Name: 90787dc646305306274fb85fefbfa49d7458cda8
Time: 2019-01-16
Author: jonas.rothfuss@gmx.de
File Name: cde/density_estimator/LSCDE.py
Class Name: LSConditionalDensityEstimation
Method Name: pdf


Project Name: brian-team/brian2
Commit Name: b260027ffeab426e802f0c4cbe29bfc322f07d2f
Time: 2014-08-12
Author: romain.brette@ens.fr
File Name: brian2/tests/test_spatialneuron.py
Class Name:
Method Name: test_finitecable