7636a32728d1d6205d4f6ceeea8e6f2d6967b81f,foreman/data_refinery_foreman/surveyor/geo.py,GeoSurveyor,create_experiment_and_samples_from_api,#GeoSurveyor#Any#,59

Before Change

                logger.info("Created OriginalFile: " + str(original_file))

            for sample_object in all_samples:
                original_file_sample_association = OriginalFileSampleAssociation()
                original_file_sample_association.sample = sample_object
                original_file_sample_association.original_file = original_file
                original_file_sample_association.save()

        return experiment_object, all_samples

    def discover_experiment_and_samples(self) -> (Experiment, List[Sample]):

After Change

                logger.info("Created OriginalFile: " + str(original_file))

            for sample_object in all_samples:
                OriginalFileSampleAssociation.objects.get_or_create(
                    sample=sample_object, original_file=original_file)

        // These are the Miniml/Soft/Matrix URLs that are always(?) provided.
        // GEO describes different types of data formatting as "families"
        for family_url in [self.get_miniml_url(experiment_accession_code)]:

Instances