dc3beb6aa73c999ed18a791c0ca85b552d0b1cb6,Python/phate/phate.py,PHATE,_find_optimal_t,#PHATE#Any#Any#Any#,916
Before Change
t_opt : int
The optimal value of t
tasklogger.log_start("optimal t")
t, h = self._von_neumann_entropy(t_max=t_max)
t_opt = vne.find_knee_point(y=h, x=t)
tasklogger.log_info("Automatically selected t = {}".format(t_opt))
tasklogger.log_complete("optimal t")
if plot:
if ax is None:
fig, ax = plt.subplots()
After Change
t_opt : int
The optimal value of t
with _logger.task("optimal t"):
t, h = self._von_neumann_entropy(t_max=t_max)
t_opt = vne.find_knee_point(y=h, x=t)
_logger.task("Automatically selected t = {}".format(t_opt))
if plot:
if ax is None:
fig, ax = plt.subplots()
show = True
In pattern: SUPERPATTERN
Frequency: 4
Non-data size: 4
Instances Project Name: KrishnaswamyLab/PHATE
Commit Name: dc3beb6aa73c999ed18a791c0ca85b552d0b1cb6
Time: 2019-10-13
Author: scottgigante@gmail.com
File Name: Python/phate/phate.py
Class Name: PHATE
Method Name: _find_optimal_t
Project Name: KrishnaswamyLab/PHATE
Commit Name: dc3beb6aa73c999ed18a791c0ca85b552d0b1cb6
Time: 2019-10-13
Author: scottgigante@gmail.com
File Name: Python/phate/phate.py
Class Name: PHATE
Method Name: fit
Project Name: KrishnaswamyLab/PHATE
Commit Name: dc3beb6aa73c999ed18a791c0ca85b552d0b1cb6
Time: 2019-10-13
Author: scottgigante@gmail.com
File Name: Python/phate/phate.py
Class Name: PHATE
Method Name: fit_transform
Project Name: KrishnaswamyLab/PHATE
Commit Name: dc3beb6aa73c999ed18a791c0ca85b552d0b1cb6
Time: 2019-10-13
Author: scottgigante@gmail.com
File Name: Python/phate/phate.py
Class Name: PHATE
Method Name: _calculate_potential